Difference between revisions of "Unix"
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− | + | == [Linux software voor medewerkers en studenten van FNWI][Linux software for employees and students of the Faculty of Science] == | |
− | + | === [Beschikbare software op door C&CZ beheerde Linux-computers][Available software on C&CZ managed Linux-computers] === | |
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* [Allerlei][All kinds of] software in /usr/local, /opt/ [en][and] /vol/ | * [Allerlei][All kinds of] software in /usr/local, /opt/ [en][and] /vol/ | ||
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− | === [Om zelf te installeren op een zelfbeheerde PC][To install on your own PC] === | + | === [Om zelf te installeren op een zelfbeheerde Linux PC][To install on your own Linux PC] === |
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* [Mathematische programmatuur][Mathematics software]: | * [Mathematische programmatuur][Mathematics software]: | ||
− | ** [[maple_|Maple]] | + | ** [[maple_|Maple]] |
** [[matlab_|Matlab]] | ** [[matlab_|Matlab]] | ||
** [[mathematica_|Mathematica]] | ** [[mathematica_|Mathematica]] | ||
+ | ** IBM - [http://www.ibm.com/spss SPSS] ([Statistiek][Statistics]) | ||
* Office software: | * Office software: | ||
− | * Konica Minolta [http://wiki.science.ru.nl/cncz/Printers_en_printen#.5BDrivers_en_instellingen_voor_Konica_Minolta_printers.5D.5BDrivers_and_settings_for_Konica_Minolta_printers.5D printerdrivers] | + | ** Konica Minolta [http://wiki.science.ru.nl/cncz/Printers_en_printen#.5BDrivers_en_instellingen_voor_Konica_Minolta_printers.5D.5BDrivers_and_settings_for_Konica_Minolta_printers.5D printerdrivers] |
** TeX: [http://www.tug.org/texlive TeX Live] | ** TeX: [http://www.tug.org/texlive TeX Live] | ||
* [Data acquisitie programmeeromgeving][Data acquisition programming environment]: | * [Data acquisitie programmeeromgeving][Data acquisition programming environment]: | ||
− | ** National Instruments [http://wiki.science.ru.nl/cncz/ | + | ** National Instruments [http://wiki.science.ru.nl/cncz/Nieuws#.5BNational_Instruments_LabVIEW_op_Install-schijf.5D.5BNational_Instruments_LabVIEW_on_Install_network_share.5D LabVIEW] |
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− | ** | + | === [Te leen bij C&CZ][To be borrowed from C&CZ] === |
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+ | [nl] | ||
+ | Op dit moment is bij C&CZ op kamer HG03.055 de volgende Linux software te lenen door medewerkers en studenten van de B-faculteit: | ||
+ | [/nl] | ||
+ | [en] | ||
+ | At this moment the following Linux software can be borrowed from C&CZ in room HG03.055 by employees and students of the Faculty of Science: | ||
+ | [/en] | ||
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+ | * Operating system: | ||
+ | ** [http://www.ubuntu.com Ubuntu] Linux | ||
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[[Category:Software]] | [[Category:Software]] |
Latest revision as of 14:23, 10 April 2015
Contents
Linux software for employees and students of the Faculty of Science
Available software on C&CZ managed Linux-computers
Name | Version | Category | Description | Installer available | On CD/DVD | Run from network share | Standard for Windows | Frequently installed | Optionally installed | Windows | Linux | OS X |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Aips | Astronomy | The NRAO Astronomical Image Processing System (AIPS) is a software package for interactive (and, optionally, batch) calibration and editing of radio interferometric data and for the calibration, construction, display and analysis of astronomical images made from those data using Fourier synthesis methods. | ✓ | |||||||||
Anaconda | 2.4.4 | Scienctific | Anaconda is a freemium open source distribution of the Python and R programming languages for large-scale data processing, predictive analytics, and scientific computing, that aims to simplify package management and deployment. Package versions are managed by the package management system conda. | ✓ | ||||||||
3 | ✓ | |||||||||||
Atom | Editors | A hackable text editor for the 21st Century | ✓ | |||||||||
Brig | 0.95 | Science | BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data. | ✓ | ||||||||
Cabal | Cabal is a system for building and packaging Haskell libraries and programs. | ✓ | ||||||||||
Caffe | Scientific | Caffe is a deep learning framework made with expression, speed, and modularity in mind. | ✓ | |||||||||
Dropbox | Dropbox is a file hosting service. | ✓ | ||||||||||
Evolution | Office | Evolution is a groupware suite which integrates mail, calendar, address book, to-do list and memo tools. | ✓ | |||||||||
Fail2ban | Fail2ban is an intrusion prevention software framework which protects computer servers from brute-force attacks. | ✓ | ||||||||||
Famias | FAMIAS (Frequency Analysis and Mode Identification for Asteroseismology) is a package of state-of-the art software tools for the analysis of photometric and spectroscopic time-series data. | ✓ | ||||||||||
Freesurfer | 5.3 | An open source software suite for processing and analyzing (human) brain MRI images. | ✓ | |||||||||
Gaussian | General purpose computational chemistry software package | ✓ | ✓ | |||||||||
Geany | Software Development | Geany is a text editor using the GTK2 toolkit with basic features of an integrated development environment. | ✓ | |||||||||
Gfortran | 4.6 | ✓ | ||||||||||
4.8 | ✓ | |||||||||||
4.9 | ✓ | |||||||||||
GitLfs | v1.2.1 | An open source Git extension for versioning large files | ✓ | |||||||||
Graphviz | Graphviz is open source graph visualization software. Graph visualization is a way of representing structural information as diagrams of abstract graphs and networks. | ✓ | ||||||||||
Grass | 7.2 | Science | GRASS GIS, commonly referred to as GRASS (Geographic Resources Analysis Support System), is a free and open source Geographic Information System (GIS) software suite used for geospatial data management and analysis, image processing, graphics and maps production, spatial modeling, and visualization. | ✓ | ||||||||
Haskell | 8.0.1 | Haskell is a standardized, general-purpose purely functional programming language, with non-strict semantics and strong static typing. It is named after logician Haskell Curry. | ✓ | |||||||||
Iraf | Image Reduction and Analysis Facility, a general purpose software system for the reduction and analysis of astronomical data. | ✓ | ||||||||||
Jags | 4.2.0 | Science | JAGS is Just Another Gibbs Sampler. It is a program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) simulation not wholly unlike BUGS. | ✓ | ||||||||
Magma | ✓ | |||||||||||
Maple | 2021 | Computer algebra system | ✓ | ✓ | ✓ | ✓ | ||||||
Mathematica | Mathematica is a symbolic mathematical computation program | ✓ | ✓ | |||||||||
Matlab | ✓ | ✓ | ||||||||||
R2012b | ✓ | |||||||||||
R2014b | ✓ | |||||||||||
R2015a | ✓ | |||||||||||
R2015b | ✓ | |||||||||||
R2016a | ✓ | |||||||||||
R2016b | ✓ | |||||||||||
R2017a | ✓ | |||||||||||
R2017b | ✓ | |||||||||||
R2018a | ✓ | |||||||||||
R2018b | ✓ | ✓ | ✓ | |||||||||
R2019a | ✓ | ✓ | ✓ | |||||||||
R2019b | ✓ | ✓ | ✓ | |||||||||
R2020a | ✓ | ✓ | ✓ | |||||||||
R2020b | ✓ | ✓ | ✓ | |||||||||
R2021a | ✓ | ✓ | ✓ | |||||||||
MongoDB | MongoDB is an open-source, document database designed for ease of development and scaling | ✓ | ||||||||||
Octave | GNU Octave is a high-level interpreted language, primarily intended for numerical computations. It provides capabilities for the numerical solution of linear and nonlinear problems, and for performing other numerical experiments. It also provides extensive graphics capabilities for data visualization and manipulation. | ✓ | ||||||||||
Parallel | 20150322 | Utils | GNU parallel is a shell tool for executing jobs in parallel using one or more computers. | ✓ | ||||||||
Ponysay | 3.0.3 | Cowsay reimplemention for ponies (essential banner software for the ponyland cluster) | ✓ | |||||||||
Povray | 3.7 | Graphics | Persistence of Vision Raytracer | ✓ | ||||||||
Pyzo | 4.4.1 | Pyzo is a free and open-source computing environment based on Python. | ✓ | |||||||||
R | The R Project for Statistical Computing | ✓ | ||||||||||
Root | 5.34 | Scientific | The ROOT system provides a set of OO frameworks with all the functionality needed to handle and analyze large amounts of data in a very efficient way. | ✓ | ||||||||
6.08 | ✓ | |||||||||||
6.18 | ✓ | |||||||||||
Rstudio | RStudio IDE is a powerful and productive user interface for R. | ✓ | ||||||||||
SPSS | 19 | SPSS - IBM Statists Software | ✓ | |||||||||
Skype | Skype is a telecommunications application software providing video chat and voice calls via the internet | ✓ | ||||||||||
Spyder | Software development | Python IDE | ✓ | |||||||||
Sqlite | 3 | Software development | Command line client for sqlite3 databases. | ✓ | ||||||||
Taskspooler | Task spooler is a Unix batch system where the tasks spooled run one after the other. | ✓ | ||||||||||
TauDEM | 5 | TauDEM (Terrain Analysis Using Digital Elevation Models) is a suite of Digital Elevation Model (DEM) tools for the extraction and analysis of hydrologic information from topography as represented by a DEM. | ✓ | |||||||||
Triqs | Scientific | TRIQS (Toolbox for Research on Interacting Quantum Systems) is a scientific project providing a set of C++ and Python libraries to develop new tools for the study of interacting quantum systems. | ✓ | |||||||||
Utrecht | Scientific | Eval Program Suite | ✓ | |||||||||
Vagrant | 1.8.5 | Vagrant enables users to create and configure lightweight, reproducible, and portable development environments. | ✓ | |||||||||
Vesta | Scientific | VESTA is a 3D visualization program for structural models, volumetric data such as electron/nuclear densities, and crystal morphologies. | ✓ | |||||||||
Wireshark | Wireshark is a network packet analyzer. | ✓ | ||||||||||
Wkhtmltopdf | 0.12.3 | Open source command line tools to render HTML into PDF and various image formats using the Qt WebKit rendering engine. | ✓ | |||||||||
Workrave | ✓ | |||||||||||
jq | jq is a lightweight and flexible command-line JSON processor | ✓ | ||||||||||
kpcli | 3.1 | A command line interface (interactive shell) to work with KeePass database files | ✓ |
- All kinds of software in /usr/local, /opt/ and /vol/
- Ubuntu packages
- A complete list of the thousands of installed Ubuntu packages can be seen with the command:
aptitude search "[a-z]" | grep ^i
An even larger list of all Ubuntu packages that can be installed, can be seen with the command:
aptitude search "[a-z]"
Send an email to postmaster if you want an extra package to be installed.
To install on your own Linux PC
The Install share contains the following Linux software:
- Mathematics software:
- Maple
- Matlab
- Mathematica
- IBM - SPSS (Statistics)
- Office software:
- Konica Minolta printerdrivers
- TeX: TeX Live
- Data acquisition programming environment:
- National Instruments LabVIEW
To be borrowed from C&CZ
At this moment the following Linux software can be borrowed from C&CZ in room HG03.055 by employees and students of the Faculty of Science:
- Operating system:
- Ubuntu Linux